Files
medassist-ng/.github/copilot-instructions.md
T
Daniel Volz b91717fc19 fix: stock correction not working for bottle type and manual calculation mode (#133)
- Fix bottle type: submitStockCorrection used blister formula for baseTotal
  but getMedTotal uses only looseTablets for bottles. Now uses getPackageSize()
  which handles both types correctly.
- Fix manual mode: same-day taken doses were counted as consumed after a stock
  correction (>= comparison with date-only timestamps). Changed to > so doses
  on the correction day are excluded.
- Add agent instruction: only release-manager may create PRs/push/merge.
2026-02-08 15:12:17 +01:00

20 KiB

MedAssist-ng - AI Coding Instructions

General Rules

  • English is the primary language: All code, comments, documentation, commit messages, PR descriptions, and GitHub releases MUST be written in English. The user may communicate in German, but all project artifacts must be in English.
  • NEVER release without explicit permission: Do NOT create tags, releases, or version bumps unless the user explicitly asks for it. Always wait for explicit confirmation before any release action.
  • NEVER create PRs, push, or merge: Only the release-manager agent (@release-manager) is allowed to create Pull Requests, push branches to the remote, or merge code. Regular agents and Copilot MUST NOT perform any git operations that affect the remote repository (no git push, no gh pr create, no gh pr merge). Present your local changes and tell the user to invoke @release-manager when ready to ship.
  • No temporary files: Delete temporary scripts/files immediately after use. Do not commit temporary debug scripts, test files, or one-off utilities to the repository.
  • Clean workspace: Always clean up after yourself. If you create a file for a specific task, delete it once done.
  • Remove old code when re-implementing: When fixing a bug or re-implementing a feature that didn't work, ALWAYS remove the old/broken code completely. Never leave dead code, unused functions, or obsolete implementations in the codebase.
  • Tests are mandatory: Every new feature and every bug fix MUST have corresponding tests. When modifying existing features, update or add tests accordingly. If old tests become obsolete due to code changes, remove or update them.
  • Fix bugs, don't test around them: If you discover incorrect behavior in the code while writing tests, ALWAYS fix the buggy code first, then write tests that verify the correct behavior. NEVER write tests that mimic or assert broken behavior. The user's time is finite and irreplaceable — every bug left unfixed wastes it.
  • Keep README.md up to date: After implementing code changes, check whether the README.md needs to be updated (e.g., new features, changed ENV variables, new commands, changed architecture, new endpoints, updated screenshots). If changes are relevant to the README, ask the user for confirmation before updating it. Do NOT silently update the README — always present the proposed README changes and wait for approval. Examples of README-relevant changes: new ENV variables, new API endpoints, new UI features, changed setup/install steps, new dependencies, changed Docker configuration.

Architecture Overview

MedAssist-ng is a medication tracking and planning app with a monorepo structure:

  • Backend: Fastify 5 + TypeScript + SQLite (Drizzle ORM) at backend/
  • Frontend: React 18 + Vite + TypeScript at frontend/
  • Database: SQLite with migrations in backend/src/db/migrations/
  • Deployment: Docker Compose with separate dev containers
  • i18n: English (en) and German (de) via react-i18next

Data Flow

Frontend (React) → /api/* proxy → Backend (Fastify) → SQLite
                   ↓ (Vite rewrites /api to /)

The Vite proxy at frontend/vite.config.ts rewrites /api/* to / - so frontend calls /api/medications but backend route is just /medications.

Development Commands

# Start dev environment (preferred)
docker compose -f docker-compose.dev.yml up

# Or run services separately:
cd backend && npm run dev      # tsx watch on port 3000
cd frontend && npm run dev     # Vite on port 5173

# Production
docker compose up -d

# Database migrations
cd backend && npm run migrate

# Run tests
cd backend && npm test              # Run all tests
cd backend && npm run test:coverage # Run with coverage report

Testing (MANDATORY)

⚠️ IMPORTANT: Every new feature MUST be covered by tests! Pull Requests without tests for new features will not be accepted.

Test Framework

  • Vitest 2.1 with v8 Coverage
  • Tests in backend/src/test/*.test.ts
  • Coverage goal: At least equal or better coverage after changes

Test Structure

File Tests
routes.test.ts API endpoints (Auth, Medications, Doses, Settings, Share, Planner)
services.test.ts Scheduler utilities (Timezone, Blisters, Usage calculation)
db.test.ts Database schema and operations

Writing Tests

// Backend Test Example (backend/src/test/example.test.ts)
import { describe, it, expect, beforeAll, afterAll } from 'vitest';
import { createTestApp, createTestUser } from './routes.test'; // Test-Utilities

describe('Feature Name', () => {
  let app: FastifyInstance;
  let authToken: string;

  beforeAll(async () => {
    app = await createTestApp();
    const user = await createTestUser(app);
    authToken = user.token;
  });

  afterAll(async () => {
    await app.close();
  });

  it('should do something specific', async () => {
    const response = await app.inject({
      method: 'GET',
      url: '/endpoint',
      headers: { Authorization: `Bearer ${authToken}` }
    });
    
    expect(response.statusCode).toBe(200);
    expect(response.json()).toHaveProperty('expectedField');
  });
});

Test Commands

cd backend
CI=true npm test            # Run tests once (ALWAYS run this way!)
CI=true npm run test:coverage  # With coverage report
npm test -- --watch         # Watch mode for manual development
npm test -- -t "test name"  # Run single test

⚠️ IMPORTANT for AI agents: ALWAYS run tests with CI=true! Without CI=true, Vitest runs in watch mode and waits for input.

CI/CD Pipeline (GitHub Actions)

Workflow Overview

Pull Request created
        ↓
┌─────────────────────────────────────┐
│  test.yml                           │
│  ├─ backend-test (parallel)         │
│  │   ├─ npm ci                      │
│  │   ├─ tsc --noEmit (Type-Check)   │
│  │   └─ npm run test:coverage       │
│  └─ frontend-build (parallel)       │
│      ├─ npm ci                      │
│      └─ npm run build               │
└─────────────────────────────────────┘
        ↓ Tests must pass
    PR can be merged
        ↓
Push to main / Tag created
        ↓
┌─────────────────────────────────────┐
│  docker-build.yml                   │
│  ├─ backend-test (parallel)         │
│  ├─ frontend-build (parallel)       │
│  └─ build-and-push (after tests)    │
│      ├─ Build Docker images         │
│      └─ Push to GHCR                │
└─────────────────────────────────────┘

Branch Protection

⚠️ IMPORTANT: The main branch is protected!
Direct pushing to main is not possible - GitHub will reject the push.
All changes must go through Pull Requests.

  • main branch is protected (Repository Rules)
  • Direct pushing is rejected by GitHub with: GH013: Repository rule violations
  • PRs require:
    • backend-test Status Check passed
    • frontend-build Status Check passed
  • After successful merge, the feature branch is automatically deleted

Workflow for changes:

# 1. Create feature branch
git checkout -b feat/my-feature

# 2. Commit and push changes
git add . && git commit -m "feat: Description"
git push -u origin feat/my-feature

# 3. Create PR (via GitHub CLI or Web)
gh pr create --title "My Feature" --body "Description"

# 4. Wait until CI is green, then merge
gh pr merge --squash --delete-branch

Workflow Files

File Trigger Purpose
.github/workflows/test.yml Pull Requests Run tests, block PR on failures
.github/workflows/docker-build.yml Push to main, Tags Tests + Build and push Docker images

Key Patterns

Backend Routes (backend/src/routes/)

Route File Endpoints
auth.ts /auth/login, /auth/register, /auth/logout, /auth/refresh, /auth/me
medications.ts CRUD /medications, /medications/:id/image
doses.ts /doses/taken - track dose intake
planner.ts /medications/usage - calculate usage for date range
settings.ts /settings - user settings CRUD
share.ts /share - create share tokens, /share/:token - public access
health.ts /health - health check endpoint

Backend Services (backend/src/services/)

Service Description
reminder-scheduler.ts Stock reminder emails/push notifications
intake-reminder-scheduler.ts Intake reminder notifications

Frontend (frontend/src/App.tsx)

  • Single-file React app with all components and state
  • Uses React Router for navigation
  • API calls use /api/ prefix (proxied by Vite)
  • Medication scheduling logic with intake schedules (multiple time entries per medication)

Frontend Components & Views

Routes / Pages

Route Description
/dashboard Main view with Coverage Cards + Upcoming Schedules timeline
/medications Medications list + New/Edit form with all fields
/planner Usage planner - calculate needed pills for date range
/settings App settings: notifications, email, thresholds, language
/schedule Full schedule view (simplified, no coverage cards)
/share/:token Public share link for "taken by" user schedule

Key React Components (in App.tsx)

Component Description
App Root component with BrowserRouter
AppRouter Handles auth check, renders AppContent or Auth
AppContent Main app shell with navigation, header, all routes
SharedSchedule Public share page for medication schedules by person
MedicationAvatar Round avatar with medication image or colored initial

Dashboard Sections

Section Description
Coverage Cards Stock status cards per medication: days left, blisters, status (Normal/Warning/Critical)
Upcoming Schedules Timeline grouped by day, collapsible days, dose tracking

Schedule/Timeline Elements

Element CSS Class Description
Past days toggle .past-days-toggle Click to show/hide past days
Day container .day-block Container for one day, collapsible
Today highlight .day-block.today Blue border/background for current day
Past day .day-block.past Dashed border, reduced opacity
All taken .day-block.all-taken Green styling when all doses taken
Day header .day-divider Date header with collapse toggle arrow
Collapse icon .day-collapse-icon ▶/▼ arrow for expand/collapse
Day summary .day-summary Shows "X/Y" doses taken or "✓ All taken"
Medication row .time-row One medication's doses for that day
Dose item .dose-item Individual dose with time, amount, take/undo button
Dose taken .dose-item.taken Green background when dose is marked taken
Dose overdue .dose-item.overdue Styling for past untaken doses
Dose future .dose-item.future Disabled button for future days

Medication Form (New/Edit)

Field Description
Commercial Name Main medication name (required)
Generic Name Scientific/generic name (optional)
Taken By Person taking the medication (optional, enables filtering/sharing)
Packs Number of full packs
Blisters per Pack Strips/blisters in each pack
Pills per Blister Tablets per strip
Loose Pills Extra pills not in blisters
Pill Weight (mg) Weight per pill for dose calculation display
Expiry Date Medication expiration
Notes Free text notes
Image Upload Medication photo (preview for new, direct upload for edit)
Intake Schedule One or more intake entries defining usage pattern

Intake Schedule

Each blister defines a recurring intake:

  • Usage (Pills): How many pills per dose
  • Every (Days): Interval (1 = daily, 7 = weekly)
  • Start (Date/Time): When the schedule starts (determines past/future doses)
  • Remind checkbox: Enable intake reminders (🔔)

Modals

Modal Trigger Content
Medication Detail Click on coverage card or medication row Full medication info, stock, schedule preview, edit/delete/ICS buttons
Image Lightbox Click medication image Full-size medication image
Share Dialog "Share" button on schedules Generate share link for specific "taken by" person
User Schedule Filter Click on "taken by" badge Filter schedule by person

Settings Sections

Section Settings
General Language toggle (EN/DE)
Stock Thresholds Warning days, critical days, expiry warning days
Email Notifications Enable, email address, stock/intake toggles
Push Notifications (Shoutrrr) Enable, URL (ntfy/gotify/etc), stock/intake toggles
Reminder Settings Days before, repeat daily, skip for taken, repeat/nagging
SMTP Email config (read-only from .env)

Settings ENV Defaults

All user settings can be pre-configured via ENV variables (see .env.example). These are only used as defaults when a new user is created. Once a user saves settings in the app, their saved values take precedence over ENV.

ENV Variable Setting Default
DEFAULT_EMAIL_ENABLED Email notifications false
DEFAULT_SHOUTRRR_ENABLED Push notifications false
DEFAULT_SHOUTRRR_URL ntfy/gotify URL (empty)
DEFAULT_REPEAT_REMINDERS_ENABLED Nagging reminders false
DEFAULT_REMINDER_REPEAT_INTERVAL_MINUTES Nag interval 30
DEFAULT_MAX_NAGGING_REMINDERS Max nags 5
DEFAULT_LOW_STOCK_DAYS Low stock threshold 30
DEFAULT_LANGUAGE UI language en

Database Schema (backend/src/db/schema.ts)

Table Description
users User accounts with password hash, auth provider, timestamps
medications Per-user medications with inventory, schedules as JSON arrays
userSettings Per-user settings: notifications, thresholds, language
refreshTokens JWT refresh tokens for auth rotation
shareTokens Public share links by takenBy person
doseTracking Tracks when doses are marked as taken

Key Medication Fields

{
  name, genericName, takenByJson,        // Identity (takenByJson is JSON array)
  packCount, blistersPerPack, pillsPerBlister, looseTablets,  // Inventory
  pillWeightMg,                          // For mg display
  usageJson, everyJson, startJson,       // Intake schedules as JSON arrays
  imageUrl, expiryDate, notes,           // Optional metadata
  intakeRemindersEnabled                 // Per-med reminder toggle
}

Dose ID Format

Dose IDs follow the pattern: {medicationId}-{blisterIndex}-{timestampMs} Example: 5-0-1735344000000 = Medication 5, Blister 0, timestamp

State Management (AppContent)

Key State Variables

State Purpose
meds Array of all user's medications
form Current medication form data
editingId ID of medication being edited (null for new)
pendingImage / pendingImagePreview Image upload for new medications
settings / savedSettings User settings current vs saved
scheduleDays How many days to show (30/90/180)
showPastDays Toggle for past days visibility
takenDoses Set of dose IDs that are marked taken
manuallyCollapsedDays / manuallyExpandedDays Day collapse state
selectedMed Medication shown in detail modal
selectedUser Filter schedule by "taken by" person

Key Computed Values (useMemo)

Value Purpose
schedule All scheduled events from buildSchedulePreview()
groupedSchedule Events grouped by day
pastDays / futureDays Split groupedSchedule by today
coverage Stock coverage calculations
coverageByMed / depletionByMed Coverage lookups

Conventions

  • TypeScript: Strict mode, ESM modules ("type": "module")
  • Styling: CSS custom properties in frontend/src/styles.css, dark/light theme via data-theme
  • API responses: Return objects directly, Fastify serializes to JSON
  • Environment: Copy .env.example.env, secrets must be 10+ chars
  • i18n: All UI text via t('key') function, translations in frontend/src/i18n/*.json
  • UI Consistency: Always use existing components for modals, buttons, and forms. For confirmation dialogs, use ConfirmModal component. Never create inline modals with custom button styling - all UI elements must match the existing design system. When adding new sections to existing components, ensure font sizes, spacing, margins, and button styles match exactly with other sections. Check existing CSS classes before creating new ones.

Database Schema Changes (IMPORTANT: Backward Compatibility!)

⚠️ CRITICAL: The app MUST remain backward compatible with older databases! Users upgrade their Docker containers but keep their existing DB. The app must NOT crash if old columns are missing.

⚠️ MANDATORY for EVERY New Feature

Before implementing ANY feature that touches user data or settings:

  1. Check if new DB columns are needed - Does the feature require storing new data?
  2. If YES → Follow ALL steps below - Schema.ts + Drizzle migration + ALTER migration + NULL-safe code
  3. NEVER skip the ALTER migration - This is the #1 cause of production 500 errors!

Common mistake: Adding a column to schema.ts and forgetting the ALTER migration in client.ts. The Drizzle migration only works for NEW databases. Existing production databases need the ALTER migration!

Schema Management with Drizzle Kit

The database schema uses Drizzle Kit for migrations. There is a single source of truth:

  • backend/src/db/schema.ts - Drizzle ORM schema definitions (TypeScript)
  • backend/drizzle/ - Generated SQL migrations (auto-generated from schema.ts)

DO NOT manually edit migration files! They are generated from schema.ts.

Adding New Columns

  1. Add to schema.ts with DEFAULT value:

    maxNaggingReminders: integer("max_nagging_reminders").notNull().default(5),
    
  2. Generate migration:

    cd backend && npx drizzle-kit generate --name add_column_name
    
  3. Add backward-compatible ALTER migration in client.ts runAlterMigrations():

    `ALTER TABLE user_settings ADD COLUMN max_nagging_reminders integer NOT NULL DEFAULT 5`,
    
  4. NULL-safe reading in routes:

    maxNaggingReminders: settings.maxNaggingReminders ?? 5,
    

Rules for New Columns

  1. ALWAYS with DEFAULT value: New columns must have NOT NULL DEFAULT <value>
  2. NULL-safe in code: All queries must use ?? defaultValue or ?? false
  3. Generate migration: Run npx drizzle-kit generate after schema changes
  4. Add ALTER migration: For backward compatibility with existing DBs

What is NOT Allowed

  • Deleting or renaming columns (breaks old DBs)
  • NOT NULL without DEFAULT (INSERT fails)
  • Reading columns without fallback in code
  • Manually editing migration SQL files
  • Documenting "delete DB" as a solution

When Backward Compatibility is NOT Possible

If a breaking change is unavoidable:

  1. Explicitly communicate: Document in release notes
  2. Migration script: Provide automatic upgrade script
  3. Version check: App should check DB version and warn

File Locations

Purpose Location
Backend entry backend/src/index.ts
Database schema backend/src/db/schema.ts
Drizzle migrations backend/drizzle/*.sql
Drizzle config backend/drizzle.config.ts
Backend routes backend/src/routes/*.ts
Backend services backend/src/services/*.ts
Frontend app frontend/src/App.tsx
Frontend auth frontend/src/components/Auth.tsx
Styles frontend/src/styles.css
i18n English frontend/src/i18n/en.json
i18n German frontend/src/i18n/de.json
Docker prod docker-compose.yml
Docker dev docker-compose.dev.yml
Env template .env.example